Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015843890.1_cds_XP_016508861.1_21838
CDS Infomation

[gene=LOC107826399] [db_xref=GeneID:107826399] [protein=transcriptional regulator ATRX homolog] [protein_id=XP_016508861.1] [location=join(317..385,1386..3059,4678..4743)] [gbkey=CDS]
Sequence

ATGGGAAGCCGGAAGTCTTCGTCCAAGAAAAAATCTTCCAAAAAGAAGAGGCCCAAAATT
TCCTCTAAGATCCGGAAGAGAAAAAGCAGAAGAAACAAATCCAAGAAGTTTTCCAGTTCT
GAGGATGACACGTCATCTTCTGCTTCCTCCGATTATTCTAGCAGTCCACAGTCTTTGTCC
TCTAGTTCAGAGGATGATTATAGTAGGAAAAGTCGTAGGCACTCACGTGATGTGAAACAC
TTGAAGAAAAGAACTCGGAGAAGATCCTCAAGCCGAGATGTCAATGGGGGTTCACCCCTT
GTAAAGAAAAGAAAAAGGTCAAATAGAAAGGGTCTTGATTATGGGAGGAAAGTGCAGAAG
AAGAAGCGAAGGAGACATGCTAGTATTAGCTCCAAAAGCAGTGACTCAAGAAGTTGTTCT
AGTTGCCGATGTGAAAATAGTATTAGCTCCAGAGGAAGTGATTGTACTAGTGGTAGTAAG
GATATTGATCAGAAGAGTCCCAGGATTAAGTCAAGAAAAGGGATGAAAGAAAAGAGAATT
TGTAATGAGCCAAGCATTGAAAAGAGGAGTGGAAGTAGGGGGCCAAGTTGTTCTTCATGT
AATCATCAATCATGTTCTTGTAATACTACTCACAGTGGGACGGGATATGTGGAAGAGAAA
AATCCTAAGCGCTTAAGATCTGTTATTATTGTTCCAGAAAAGACATACGAGAAAGAGGGA
GACGAACAGGGAACAGATATGCTTAAGGAAGAGAGTTTGAATAAGCATCATGGTTGCCCT
TCCTGCAGAAACCATGACAATAATGACCTGGAAAGTAAAAGGAAATTAGCTTCTTGTTCT
TGTTTCTCGTCTAATCAAACAATGCAGGTTGAAAATTTGATAATAGTTGATGCAGTTCCT
CCCAATAGTGAAACTATTGGCCCCACAAAAGTTGGTGGTATTATAGATCCTCATCCAAAT
AAAGTCAAGGAAGTAAGTCACAATAATGGAGGTGAGGGTGGGGTTTCTGATAGTAATGCT
AATTCAGGTTTCGAGGATCTTGAGACTCTCTTAAGGAAAAAGGCATTGGAGAACTTGCAG
AAGTTCCGTAAAGAGCTTCAAACAAATTTGAAATCTGGTGCCAAGGAAAAGAAGAATGAC
AGTGATGTTAATCGGTTATCTCCTCCAAAGACTGAGGTTCTACCGTACAAGTACCTGGAA
CAGGAAAATAAAGAGGGATTGGCTTTAAATCAAGTTATAGGATGTAGAAACAAGCTTGTA
ACTAATGAGGAGTTTCCTCATTCCACAAAGATTGAGATAAATACTGCAGTTGAAGAGAAC
AACGGAAAACGAACTGGATACATTAAGGAGAGTATTACGCAACCTGCTGATAGATCAGCG
CTCTCACGGAGTCCAGAAAAGGAGGACCATACCGCTGCACCAGTTCATATCGATGAATCG
GAACCTGGTAAACCATCATGTATTACCACAGTACAGACATATAAAAGGGAAGATTCATTG
GCTTCCCAGAGAAACATAAATAAAACACCAGATCCTTTGAGACCTGGAGTTCTTAGCACC
GGGACCAGCGATAACTTAGGCATCGGAGCTGTTAATACCAGTATCCGTCCTAATGTAGAA
ACCACTTCTGGTGTCAGATCCACATCTGAAGGACTTACTTCAAAACACCAGCCAGATGCC
AAGGATGGCTCTCAGTTCGAACAAAAGACCATGTCTGTAATGAGGGGTGGTGAAATGGTA
CAGGTAAACTACAAGGTTTACATCCCTAAGAGGGCTCCTGCTCTAGCCAGGAGACAACTC
AAGCGGTGA

Peptide Sequence

PEP ID

XP_016508861.1
PEP Infomation

PREDICTED: transcriptional regulator ATRX homolog [Nicotiana tabacum]
Sequence

MGSRKSSSKKKSSKKKRPKISSKIRKRKSRRNKSKKFSSSEDDTSSSASSDYSSSPQSLS
SSSEDDYSRKSRRHSRDVKHLKKRTRRRSSSRDVNGGSPLVKKRKRSNRKGLDYGRKVQK
KKRRRHASISSKSSDSRSCSSCRCENSISSRGSDCTSGSKDIDQKSPRIKSRKGMKEKRI
CNEPSIEKRSGSRGPSCSSCNHQSCSCNTTHSGTGYVEEKNPKRLRSVIIVPEKTYEKEG
DEQGTDMLKEESLNKHHGCPSCRNHDNNDLESKRKLASCSCFSSNQTMQVENLIIVDAVP
PNSETIGPTKVGGIIDPHPNKVKEVSHNNGGEGGVSDSNANSGFEDLETLLRKKALENLQ
KFRKELQTNLKSGAKEKKNDSDVNRLSPPKTEVLPYKYLEQENKEGLALNQVIGCRNKLV
TNEEFPHSTKIEINTAVEENNGKRTGYIKESITQPADRSALSRSPEKEDHTAAPVHIDES
EPGKPSCITTVQTYKREDSLASQRNINKTPDPLRPGVLSTGTSDNLGIGAVNTSIRPNVE
TTSGVRSTSEGLTSKHQPDAKDGSQFEQKTMSVMRGGEMVQVNYKVYIPKRAPALARRQL
KR

Transcript Sequence

Gene sequence data has not been registered.